| Organism | Product used | Journal | Year | Author | Title | Link to Publication |
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Plants | | | | | | | |
| Barley | LTC | Plant Physiology | 2014 | Ariyadasa et al. | A Sequence-ready physical map of barley anchored genetically by two million single-nucleotide polymorphisms | Link |
| Eucalyptus | Multipoint | New Phytologist | 2009 | Foucart et al. | Overexpression of EgROP1, a Eucalyptus vascular‐expressed Rac‐like small GTPase, affects secondary xylem formation in Arabidopsis tha | Link |
| Maize | Multipoint | Genetics | 2006 | Fu et al. | Genetic Dissection of Intermated Recombinant Inbred Lines Using a New Genetic Map of Maize | Link |
| Maritime Pine | MultiQTL | Plant, Cell and Environment | 2002 | Brendel et al. | Genetic parameters and QTL analysis of δ13C and ring width in maritime pine | Link |
| Maritime Pine | Multipoint, MultiQTL | Journal of Experimental Botany | 2014 | Marguerit et al. | The genetics of water-use efficiency and its relation to growth in maritime pine | Link |
| Oat | Multipoint – Consensus | The Plant Genome | 2016 | Chaffin et al. | A Consensus Map in Cultivated Hexaploid Oat Reveals Conserved Grass Synteny with Substantial Subgenome Rearrangement | Link |
| Poplar | MultiQTL | New Phytologist | 2010 | Rohde et al. | Bud set in poplar – genetic dissection of a complex trait in natural and hybrid populations | Link |
| Populus | MultiQTL | The Plant Journal | 2006 | Morreel et al. | Genetical metabolomics of flavonoid biosynthesis in Populus: a case study | Link |
| Populus | MultiQTL | Food and Energy Security | 2013 | Viger et al. | Toward improved drought tolerance in bioenergy crops: QTL for carbon isotope composition and stomatal conductance in Populus | Link |
| Potato Bean | Multipoint | Theoretical and Applied Genetics | 2018 | Singh et al. | A transcriptome‑SNP‑derived linkage map of Apios Americana (potato bean) provides insights about genome re‑organization and synteny conservation in the phaseoloid legumes | Link |
| Rapeseed | Multipoint | DNA Research | 2012 | Raman et al. | Diversity Array Technology Markers: Genetic Diversity Analyses and Linkage Map Construction in Rapeseed (Brassica napus L.). | Link |
| Rice | MultiQTL | Nature/Scientific Reports | 2017 | Liu et al. | Characterization of a major QTL for manganese accumulation in rice grain | Link |
| Ryegrass | LTC | Annals of Botany | 2019 | Harper et al. | Integrating a newly developed BAC-based physical mapping resource for Lolium perenne with a genome-wide association study across a L. perenne European ecotype collection identifies genomic contexts associated with agriculturally important traits | Link |
| Silene Latifolia | MultiQTL | Evolution | 2006 | Scotti & Delph. | Selective trade-offs and sex-chromosome evolution in Silene latifolia | Link |
| Sorghum | Multipoint | BMC Genomics | 2008 | Mace et al. | DArT markers: diversity analyses and mapping in Sorghum bicolor | Link |
| Sugarcane | Multipoint, MultiQTL | Euphytica | 2013 | Singh et al. | Genetic mapping and QTL analysis for sugar yield-related traits in sugarcane | Link |
| Sweet Cherry | MultiQTL | Nature/Scientific Reports | 2019 | Cai et al. | A fruit firmness QTL identified on linkage group 4 in sweet cherry (Prunus avium L.) is associated with domesticated and bred germplasm | Link |
| Watermelon | MultiPoint – Ultradense | G3 | 2014 | Reddy et al. | High-resolution genetic map for understanding the effect of genome-wide recombination rate on nucleotide diversity in watermelon | Link |
| Wheat | LTC | International Plant and Animal Genome Conference XX | 2012 | Frenkel et al. | Contig Anchoring of Wheat Chromosome1BS Using LTC Analytical Tools | Link |
| Wheat | LTC | Genome Biology | 2013 | Raats et al. | The physical map of wheat chromosome 1BS provides insights into its gene space organization and evolution | Link |
| Wheat | Multipoint | The Plant Journal | 2016 | Phan et al. | Differential effector gene expression underpins epistasis in a plant fungal disease | Link |
| Wheat | LTC | Genome Biology | 2018 | Keeble-Gagnèr et al. | Optical and physical mapping with local finishing enables megabase-scale resolution of agronomically important regions in the wheat genome | Link |
| Wheat | Multipoint | Nature/Nature Communications | 2018 | Klymiuk et al. | Cloning of the wheat Yr15 resistance gene sheds light on the plant tandem kinase-pseudokinase family | Link |
| Wheat | Multipoint, MultiQTL | Science | 2018 | Appels et al. | Shifting the limits in wheat research and breeding using a fully annotated reference genome | Link |
| Wheat | Multipoint | PNAS | 2019 | Sakuma et al. | Unleashing floret fertility in wheat through the mutation of a homeobox gene | Link |
| White Spruce | MultiQTL | BMC Genomics | 2011 | Pelgas et al. | QTL mapping in white spruce: gene maps and genomic regions underlying adaptive traits across pedigrees, years and environments | Link |
| Wild Emmer Wheat | MultiQTL | PNAS | 2003 | Peng et al. | Domestication quantitative trait loci in Triticum dicoccoides, the progenitor of wheat | Link |
| Wild Emmer Wheat | MultiQTL | BioRXIV | 2019 | Fatiukha et/ al. | Grain Protein Content QTLs Identified in a Durum × Wild Emmer Wheat Mapping Population Tested in Five Environments | Link |